Bering.plotting.Plot_Segmentation_Post

Bering.plotting.Plot_Segmentation_Post(bg, location, df_window_raw=None, df_window_pred=None, predictions=None, n_neighbors=10, window_size=50.0, use_image=True, pos_thresh=0.6, resolution=0.05, num_edges_perSpot=300, min_prob_nodeclf=0.3, n_iters=10)[source]: Plot Original Cell IDs and Cell ID distribution on latent space Either input a cell name and then extract a table or a pre-filtered spots window.